Related Resources from Protein Structure Prediction

Sequence Comparison	Structure Comparison
Protein Structure Prediction	Model Evaluation
PDB Viewer	Meta Online Resources

PSQS: An energy-like measure of the quality of protein structure.
Pacgum: A tool for checking the regularity of atomic packing in any given 3D model of protein.
PROCHECK: Check the Stereochemical Quality of Protein Structures.
ANOLEA: Perform energy calculations on a protein chain.
PROSA: PROtein Structure Analysis.
Verify3D: A visual analysis of the quality of a putative crystal structure for a protein.
WhatCheck: Protein verification tools from the WHAT IF program.
Biotech: Biotech Validation Suite for Protein Structures.

Structure prediction with online resources: structure evaluation, structure comparison and analysis tools.